Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015865111.1_cds_XP_016516221.1_28486
CDS Infomation

[gene=LOC107832841] [db_xref=GeneID:107832841] [protein=putative UPF0481 protein At3g02645] [protein_id=XP_016516221.1] [location=join(28637..29102,29727..30265,31000..31551)] [gbkey=CDS]
Sequence

ATGACTATAGAATCTTTCATTAATAATCCTGAAACTGAGAAGCGTTGGCTAACTCAATGC
GCAAATTCCTTCAAATTAAACAAAGAAATAGCCATTGACTTCTCTCCATATGTTTGTCAA
GTTCCCAAAACAATTAAAGAAACTAAAATCCAAGCTTATATCCCTCAAAAAATAGGCCTT
GGTCCATACCATTGTTTTCGTCCTGAGTTTTTTGTCACTGAAAGACACAAACTAACTATA
GCCAAAAATTGCATGGATTTTTCCAAAGTCCAACATTTGATAACTGAGACATTAATATTT
TTTGAGCCAAGAATTCGAGCACAGTATGATAAGTTCTTGGATATTGATACTCATACACTA
TGCTGGATATTGACCATTGATTCTCTCTACTTGCTTCACTTTTTAAACAGTTATATACCA
CATCAAGAAATAGATTCTCAAGTTCAAAGCTTGCCTCAAGAAAAAAATCAAGAAATAAAT
TCTGAACGTCGAAGCATGGCTCAAGACATCATAATGCTCGAGAATCAAATCCCAAGTATA
GTTCTCATTGAAATCCAGATGTCTCTAAGTCAACATTTCTCAAAGCTATTTAAAGATTTG
TTCTTCAATTTCTGCAAAGCACACTCTCCTCTTCAACTTTCGGAGACAAAGAAGTTTCGC
AGTTTCGTGTTTTGCAAAGATCGCTCTCCTCATTTGCTGGATTATATGCATCAATTGATA
GTCAATAATCGCGCGATTATTGAAGAGGAGGAAGAAGAATATGATGATTCAAAATATTAT
GATGATACGTGTAATAGGACTTTTGAAGATCATATTGTTGTGAAAGTAGTGAGAAATATT
GCTGGTATTATTCCAGGAGGTGGCATCGTTGAGAAACCACTTAGTTTGATGTCCCAATTG
CCATGGGACCAAATCACTGGACTAATTAAAAAGGAAGACGAAAGCAAACCAAAAATTGAA
GAGATTGAAATACCATCAGTCGCAGAACTTGAAGAAATTGCTAAGATAAAATTCAAGCTC
ACGGAAGGAGGGATCAGGGATATAAAATTTATAGAAGAAGGAGGCGAACACAGATTTTAT
CTTCCTCAAATCACTCTAAATTCCGATTCTGAAGTAATATTAAGAAACTTAGTAGCATAC
GAAGCAGCTACTGCTAGTCCAGAATCATCCCTCGAGCTAGCTGAATATGTTGACTTCATG
TGTGGAATTGTTGATACTCCAAAAGATGTTAATATTCTCAAAAAAGCTAATATTATTAAA
GATGGAAGTTCTCTAAATGATGAGGAAATTGCTGAATTATTCAATGGGATAACTAAAACA
ACTGGGAAATTCAACAAGAAGAAGAAGTCGGATTTAGAGAAGGCTATTGAAACAGTGAAT
GAGAAATTTGATAATACATTAAGGGTGAAGACTTATAGGTTTATCAAGAAGTATATTTAT
ACTTCTTGGAAGTTTTTAACGTTGTTTTCTACTGTACTGCTTATTTTACTGATTTGTTTG
CAAGTGTTTTGCCAAGTTTATGGCTGCAGCAACCGGTGGTTTCGTACTTCTTCTTGA

Peptide Sequence

PEP ID

XP_016516221.1
PEP Infomation

PREDICTED: putative UPF0481 protein At3g02645 [Nicotiana tabacum]
Sequence

MTIESFINNPETEKRWLTQCANSFKLNKEIAIDFSPYVCQVPKTIKETKIQAYIPQKIGL
GPYHCFRPEFFVTERHKLTIAKNCMDFSKVQHLITETLIFFEPRIRAQYDKFLDIDTHTL
CWILTIDSLYLLHFLNSYIPHQEIDSQVQSLPQEKNQEINSERRSMAQDIIMLENQIPSI
VLIEIQMSLSQHFSKLFKDLFFNFCKAHSPLQLSETKKFRSFVFCKDRSPHLLDYMHQLI
VNNRAIIEEEEEEYDDSKYYDDTCNRTFEDHIVVKVVRNIAGIIPGGGIVEKPLSLMSQL
PWDQITGLIKKEDESKPKIEEIEIPSVAELEEIAKIKFKLTEGGIRDIKFIEEGGEHRFY
LPQITLNSDSEVILRNLVAYEAATASPESSLELAEYVDFMCGIVDTPKDVNILKKANIIK
DGSSLNDEEIAELFNGITKTTGKFNKKKKSDLEKAIETVNEKFDNTLRVKTYRFIKKYIY
TSWKFLTLFSTVLLILLICLQVFCQVYGCSNRWFRTSS

Transcript Sequence

Gene sequence data has not been registered.